PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01403.1.g00070.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 300aa    MW: 31241.8 Da    PI: 6.2421
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01403.1.g00070.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.18.5e-19100157159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   ldDg++WrKYGqK +++se+pr    Ct+    gC+++k+v+ s+++p+  ++ Y g+H+++
  Zpz_sc01403.1.g00070.1.sm.mk 100 LDDGHAWRKYGQKRIHDSENPR----CTHMpdqGCKARKQVQVSDSNPSEYVVSYFGQHTCR 157
                                   59*******************6....9998888**************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.4E-2093159IPR003657WRKY domain
SuperFamilySSF1182902.48E-1994159IPR003657WRKY domain
PROSITE profilePS5081117.21395159IPR003657WRKY domain
SMARTSM007743.6E-28100158IPR003657WRKY domain
PfamPF031062.5E-17101157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MASPGSSGDR SPAVPRKVLD DLLGVHKRAA MLQTMVDGSP AAARELVDGM MTRVTNALTT  60
ALNTSGVVVD GVEWSSLGSR GWPGGRRDSA GAVTVTTTTL DDGHAWRKYG QKRIHDSENP  120
RCTHMPDQGC KARKQVQVSD SNPSEYVVSY FGQHTCRDPS TVPIVIDAPM NLSNFISFGG  180
STAATSAAHA VPPRRQQAVA PTTMRSRLAG YISSSLPAAA EQRCRSEEAI SLAGELGAVV  240
AGALSNAGRT TVGSAPEFDV LLDGGIDTAG SFPSSPSSLG GFMTGSFGSF GDDDFFGFDP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004958704.12e-70PREDICTED: probable WRKY transcription factor 38
TrEMBLK3ZUW42e-70K3ZUW4_SETIT; Uncharacterized protein
STRINGSi030395m5e-70(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125272837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.18e-21WRKY DNA-binding protein 46